Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IsxA1A546 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.15■□□□□ 0.66
IsxA1A546 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IsxA1A546 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IsxA1A546 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IsxA1A546 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IsxA1A546 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IsxA1A546 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
IsxA1A546 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IsxA1A546 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
IsxA1A546 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IsxA1A546 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IsxA1A546 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
IsxA1A546 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
IsxA1A546 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
IsxA1A546 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
IsxA1A546 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IsxA1A546 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IsxA1A546 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.14■□□□□ 0.65
IsxA1A546 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.14■□□□□ 0.65
IsxA1A546 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IsxA1A546 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IsxA1A546 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.14■□□□□ 0.65
IsxA1A546 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IsxA1A546 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
IsxA1A546 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IsxA1A546 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IsxA1A546 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IsxA1A546 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
IsxA1A546 Gm9812-201ENSMUST00000061934 968 ntBASIC19.13■□□□□ 0.65
IsxA1A546 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
IsxA1A546 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IsxA1A546 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
IsxA1A546 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IsxA1A546 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IsxA1A546 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IsxA1A546 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
IsxA1A546 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IsxA1A546 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IsxA1A546 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IsxA1A546 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IsxA1A546 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IsxA1A546 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IsxA1A546 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IsxA1A546 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.11■□□□□ 0.65
IsxA1A546 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.11■□□□□ 0.65
IsxA1A546 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
IsxA1A546 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
IsxA1A546 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IsxA1A546 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IsxA1A546 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.11■□□□□ 0.65
IsxA1A546 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IsxA1A546 Gm6311-201ENSMUST00000073790 878 ntBASIC19.11■□□□□ 0.65
IsxA1A546 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IsxA1A546 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
IsxA1A546 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
IsxA1A546 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
IsxA1A546 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
IsxA1A546 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IsxA1A546 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.1■□□□□ 0.65
IsxA1A546 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IsxA1A546 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IsxA1A546 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IsxA1A546 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Mir6538-201ENSMUST00000183713 110 ntBASIC19.09■□□□□ 0.65
IsxA1A546 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
IsxA1A546 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
IsxA1A546 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
IsxA1A546 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
IsxA1A546 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
IsxA1A546 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IsxA1A546 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IsxA1A546 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IsxA1A546 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IsxA1A546 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IsxA1A546 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IsxA1A546 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
IsxA1A546 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IsxA1A546 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
IsxA1A546 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IsxA1A546 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IsxA1A546 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.06■□□□□ 0.64
IsxA1A546 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
IsxA1A546 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IsxA1A546 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IsxA1A546 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
IsxA1A546 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.05■□□□□ 0.64
IsxA1A546 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IsxA1A546 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms