Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv1-88A0A140T8N1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Igkv1-88A0A140T8N1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv1-88A0A140T8N1 Gm43006-201ENSMUST00000197702 1602 ntBASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv1-88A0A140T8N1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv1-88A0A140T8N1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv1-88A0A140T8N1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv1-88A0A140T8N1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC13.56□□□□□ -0.24
Igkv1-88A0A140T8N1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv1-88A0A140T8N1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Igkv1-88A0A140T8N1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv1-88A0A140T8N1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv1-88A0A140T8N1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Notumos-201ENSMUST00000151998 2659 ntBASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv1-88A0A140T8N1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv1-88A0A140T8N1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms