Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.22■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.22■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rpl23a-ps3A0A140T8M7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Gm5921-201ENSMUST00000075898 882 ntBASIC17.2■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.2■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.2■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Iqck-206ENSMUST00000208658 2891 ntBASIC17.14■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rpl23a-ps3A0A140T8M7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.13■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.13■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms