Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC44.77■■■■■ 4.76
Gm35339A0A140LHH9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC44.76■■■■■ 4.76
Gm35339A0A140LHH9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC44.75■■■■■ 4.75
Gm35339A0A140LHH9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC44.75■■■■■ 4.75
Gm35339A0A140LHH9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC44.74■■■■■ 4.75
Gm35339A0A140LHH9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC44.74■■■■■ 4.75
Gm35339A0A140LHH9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC44.74■■■■■ 4.75
Gm35339A0A140LHH9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC44.74■■■■■ 4.75
Gm35339A0A140LHH9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC44.73■■■■■ 4.75
Gm35339A0A140LHH9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC44.73■■■■■ 4.75
Gm35339A0A140LHH9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC44.73■■■■■ 4.75
Gm35339A0A140LHH9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC44.72■■■■■ 4.75
Gm35339A0A140LHH9 Gm42642-201ENSMUST00000200683 355 ntBASIC44.72■■■■■ 4.75
Gm35339A0A140LHH9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC44.72■■■■■ 4.75
Gm35339A0A140LHH9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC44.72■■■■■ 4.75
Gm35339A0A140LHH9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC44.72■■■■■ 4.75
Gm35339A0A140LHH9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC44.72■■■■■ 4.75
Gm35339A0A140LHH9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC44.72■■■■■ 4.75
Gm35339A0A140LHH9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC44.71■■■■■ 4.75
Gm35339A0A140LHH9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC44.71■■■■■ 4.75
Gm35339A0A140LHH9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC44.7■■■■■ 4.75
Gm35339A0A140LHH9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC44.7■■■■■ 4.75
Gm35339A0A140LHH9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC44.69■■■■■ 4.74
Gm35339A0A140LHH9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC44.68■■■■■ 4.74
Gm35339A0A140LHH9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC44.68■■■■■ 4.74
Gm35339A0A140LHH9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC44.68■■■■■ 4.74
Gm35339A0A140LHH9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC44.67■■■■■ 4.74
Gm35339A0A140LHH9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC44.66■■■■■ 4.74
Gm35339A0A140LHH9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC44.66■■■■■ 4.74
Gm35339A0A140LHH9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC44.65■■■■■ 4.74
Gm35339A0A140LHH9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC44.65■■■■■ 4.74
Gm35339A0A140LHH9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC44.65■■■■■ 4.74
Gm35339A0A140LHH9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC44.64■■■■■ 4.74
Gm35339A0A140LHH9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC44.64■■■■■ 4.74
Gm35339A0A140LHH9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC44.64■■■■■ 4.74
Gm35339A0A140LHH9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC44.63■■■■■ 4.73
Gm35339A0A140LHH9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC44.63■■■■■ 4.73
Gm35339A0A140LHH9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC44.62■■■■■ 4.73
Gm35339A0A140LHH9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC44.62■■■■■ 4.73
Gm35339A0A140LHH9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC44.62■■■■■ 4.73
Gm35339A0A140LHH9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC44.61■■■■■ 4.73
Gm35339A0A140LHH9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC44.61■■■■■ 4.73
Gm35339A0A140LHH9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC44.6■■■■■ 4.73
Gm35339A0A140LHH9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC44.6■■■■■ 4.73
Gm35339A0A140LHH9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC44.6■■■■■ 4.73
Gm35339A0A140LHH9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC44.59■■■■■ 4.73
Gm35339A0A140LHH9 AV356131-201ENSMUST00000206201 750 ntBASIC44.59■■■■■ 4.73
Gm35339A0A140LHH9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC44.59■■■■■ 4.73
Gm35339A0A140LHH9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC44.59■■■■■ 4.73
Gm35339A0A140LHH9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC44.58■■■■■ 4.73
Gm35339A0A140LHH9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC44.58■■■■■ 4.73
Gm35339A0A140LHH9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC44.57■■■■■ 4.73
Gm35339A0A140LHH9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC44.57■■■■■ 4.73
Gm35339A0A140LHH9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC44.57■■■■■ 4.73
Gm35339A0A140LHH9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC44.57■■■■■ 4.72
Gm35339A0A140LHH9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC44.57■■■■■ 4.72
Gm35339A0A140LHH9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC44.57■■■■■ 4.72
Gm35339A0A140LHH9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC44.56■■■■■ 4.72
Gm35339A0A140LHH9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC44.56■■■■■ 4.72
Gm35339A0A140LHH9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC44.56■■■■■ 4.72
Gm35339A0A140LHH9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC44.56■■■■■ 4.72
Gm35339A0A140LHH9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC44.56■■■■■ 4.72
Gm35339A0A140LHH9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC44.56■■■■■ 4.72
Gm35339A0A140LHH9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC44.55■■■■■ 4.72
Gm35339A0A140LHH9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC44.55■■■■■ 4.72
Gm35339A0A140LHH9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC44.55■■■■■ 4.72
Gm35339A0A140LHH9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC44.55■■■■■ 4.72
Gm35339A0A140LHH9 Gm18671-201ENSMUST00000214826 683 ntBASIC44.55■■■■■ 4.72
Gm35339A0A140LHH9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC44.55■■■■■ 4.72
Gm35339A0A140LHH9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC44.55■■■■■ 4.72
Gm35339A0A140LHH9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC44.54■■■■■ 4.72
Gm35339A0A140LHH9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC44.53■■■■■ 4.72
Gm35339A0A140LHH9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC44.53■■■■■ 4.72
Gm35339A0A140LHH9 Gm10209-201ENSMUST00000203397 1607 ntBASIC44.53■■■■■ 4.72
Gm35339A0A140LHH9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC44.53■■■■■ 4.72
Gm35339A0A140LHH9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC44.53■■■■■ 4.72
Gm35339A0A140LHH9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC44.53■■■■■ 4.72
Gm35339A0A140LHH9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC44.52■■■■■ 4.72
Gm35339A0A140LHH9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC44.52■■■■■ 4.72
Gm35339A0A140LHH9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC44.52■■■■■ 4.72
Gm35339A0A140LHH9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC44.52■■■■■ 4.72
Gm35339A0A140LHH9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC44.51■■■■■ 4.72
Gm35339A0A140LHH9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC44.51■■■■■ 4.72
Gm35339A0A140LHH9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC44.51■■■■■ 4.72
Gm35339A0A140LHH9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC44.5■■■■■ 4.71
Gm35339A0A140LHH9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC44.5■■■■■ 4.71
Gm35339A0A140LHH9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC44.5■■■■■ 4.71
Gm35339A0A140LHH9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC44.49■■■■■ 4.71
Gm35339A0A140LHH9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC44.49■■■■■ 4.71
Gm35339A0A140LHH9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC44.49■■■■■ 4.71
Gm35339A0A140LHH9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC44.49■■■■■ 4.71
Gm35339A0A140LHH9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC44.48■■■■■ 4.71
Gm35339A0A140LHH9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC44.47■■■■■ 4.71
Gm35339A0A140LHH9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC44.47■■■■■ 4.71
Gm35339A0A140LHH9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC44.47■■■■■ 4.71
Gm35339A0A140LHH9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC44.47■■■■■ 4.71
Gm35339A0A140LHH9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC44.46■■■■■ 4.71
Gm35339A0A140LHH9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC44.46■■■■■ 4.71
Gm35339A0A140LHH9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC44.45■■■■■ 4.71
Gm35339A0A140LHH9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC44.45■■■■■ 4.71
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms