Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv29A0A0G2LB96 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv29A0A0G2LB96 Gm7332-201ENSMUST00000118351 454 ntBASIC17.15■□□□□ 0.34
Trbv29A0A0G2LB96 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv29A0A0G2LB96 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv29A0A0G2LB96 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv29A0A0G2LB96 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv29A0A0G2LB96 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv29A0A0G2LB96 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.14■□□□□ 0.33
Trbv29A0A0G2LB96 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv29A0A0G2LB96 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv29A0A0G2LB96 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv29A0A0G2LB96 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv29A0A0G2LB96 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv29A0A0G2LB96 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv29A0A0G2LB96 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv29A0A0G2LB96 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv29A0A0G2LB96 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.13■□□□□ 0.33
Trbv29A0A0G2LB96 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trbv29A0A0G2LB96 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv29A0A0G2LB96 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv29A0A0G2LB96 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv29A0A0G2LB96 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv29A0A0G2LB96 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv29A0A0G2LB96 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.13■□□□□ 0.33
Trbv29A0A0G2LB96 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv29A0A0G2LB96 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv29A0A0G2LB96 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv29A0A0G2LB96 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv29A0A0G2LB96 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.11■□□□□ 0.33
Trbv29A0A0G2LB96 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv29A0A0G2LB96 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv29A0A0G2LB96 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trbv29A0A0G2LB96 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv29A0A0G2LB96 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trbv29A0A0G2LB96 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv29A0A0G2LB96 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv29A0A0G2LB96 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.09■□□□□ 0.33
Trbv29A0A0G2LB96 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv29A0A0G2LB96 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv29A0A0G2LB96 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv29A0A0G2LB96 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv29A0A0G2LB96 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv29A0A0G2LB96 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv29A0A0G2LB96 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv29A0A0G2LB96 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv29A0A0G2LB96 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.08■□□□□ 0.32
Trbv29A0A0G2LB96 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Trbv29A0A0G2LB96 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv29A0A0G2LB96 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv29A0A0G2LB96 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv29A0A0G2LB96 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv29A0A0G2LB96 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv29A0A0G2LB96 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.06■□□□□ 0.32
Trbv29A0A0G2LB96 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv29A0A0G2LB96 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trbv29A0A0G2LB96 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv29A0A0G2LB96 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv29A0A0G2LB96 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv29A0A0G2LB96 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv29A0A0G2LB96 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.06■□□□□ 0.32
Trbv29A0A0G2LB96 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv29A0A0G2LB96 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms