Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv8-27A0A0G2JF28 AC164883.3-201ENSMUST00000227396 1774 ntBASIC12.95□□□□□ -0.34
Igkv8-27A0A0G2JF28 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv8-27A0A0G2JF28 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv8-27A0A0G2JF28 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv8-27A0A0G2JF28 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv8-27A0A0G2JF28 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv8-27A0A0G2JF28 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv8-27A0A0G2JF28 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv8-27A0A0G2JF28 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv8-27A0A0G2JF28 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv8-27A0A0G2JF28 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv8-27A0A0G2JF28 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv8-27A0A0G2JF28 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv8-27A0A0G2JF28 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv8-27A0A0G2JF28 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv8-27A0A0G2JF28 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Igkv8-27A0A0G2JF28 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv8-27A0A0G2JF28 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv8-27A0A0G2JF28 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv8-27A0A0G2JF28 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Igkv8-27A0A0G2JF28 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv8-27A0A0G2JF28 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv8-27A0A0G2JF28 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv8-27A0A0G2JF28 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC12.91□□□□□ -0.34
Igkv8-27A0A0G2JF28 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv8-27A0A0G2JF28 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv8-27A0A0G2JF28 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv8-27A0A0G2JF28 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Igkv8-27A0A0G2JF28 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Igkv8-27A0A0G2JF28 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv8-27A0A0G2JF28 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Igkv8-27A0A0G2JF28 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv8-27A0A0G2JF28 Hsf1-204ENSMUST00000226872 2104 ntBASIC12.91□□□□□ -0.34
Igkv8-27A0A0G2JF28 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv8-27A0A0G2JF28 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv8-27A0A0G2JF28 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC12.9□□□□□ -0.34
Igkv8-27A0A0G2JF28 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv8-27A0A0G2JF28 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv8-27A0A0G2JF28 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Igkv8-27A0A0G2JF28 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv8-27A0A0G2JF28 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv8-27A0A0G2JF28 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv8-27A0A0G2JF28 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv8-27A0A0G2JF28 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv8-27A0A0G2JF28 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Igkv8-27A0A0G2JF28 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv8-27A0A0G2JF28 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv8-27A0A0G2JF28 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv8-27A0A0G2JF28 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC12.88□□□□□ -0.35
Igkv8-27A0A0G2JF28 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv8-27A0A0G2JF28 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv8-27A0A0G2JF28 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv8-27A0A0G2JF28 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms