Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.95□□□□□ -0.02
Trbv16A0A0B4J1H3 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.94□□□□□ -0.02
Trbv16A0A0B4J1H3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv16A0A0B4J1H3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv16A0A0B4J1H3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv16A0A0B4J1H3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv16A0A0B4J1H3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbv16A0A0B4J1H3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv16A0A0B4J1H3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv16A0A0B4J1H3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv16A0A0B4J1H3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv16A0A0B4J1H3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv16A0A0B4J1H3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv16A0A0B4J1H3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv16A0A0B4J1H3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv16A0A0B4J1H3 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.91□□□□□ -0.02
Trbv16A0A0B4J1H3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Trbv16A0A0B4J1H3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trbv16A0A0B4J1H3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv16A0A0B4J1H3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv16A0A0B4J1H3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv16A0A0B4J1H3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv16A0A0B4J1H3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trbv16A0A0B4J1H3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv16A0A0B4J1H3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv16A0A0B4J1H3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv16A0A0B4J1H3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trbv16A0A0B4J1H3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv16A0A0B4J1H3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv16A0A0B4J1H3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv16A0A0B4J1H3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv16A0A0B4J1H3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv16A0A0B4J1H3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv16A0A0B4J1H3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv16A0A0B4J1H3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv16A0A0B4J1H3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv16A0A0B4J1H3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv16A0A0B4J1H3 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.89□□□□□ -0.03
Trbv16A0A0B4J1H3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv16A0A0B4J1H3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.89□□□□□ -0.03
Trbv16A0A0B4J1H3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv16A0A0B4J1H3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv16A0A0B4J1H3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.89□□□□□ -0.03
Trbv16A0A0B4J1H3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv16A0A0B4J1H3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv16A0A0B4J1H3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms