Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv5A0A0B4J1G9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv5A0A0B4J1G9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Gm45364-201ENSMUST00000210883 159 ntBASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv5A0A0B4J1G9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv5A0A0B4J1G9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv5A0A0B4J1G9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv5A0A0B4J1G9 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.54■□□□□ 0.24
Trbv5A0A0B4J1G9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trbv5A0A0B4J1G9 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.54■□□□□ 0.24
Trbv5A0A0B4J1G9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv5A0A0B4J1G9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv5A0A0B4J1G9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv5A0A0B4J1G9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv5A0A0B4J1G9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv5A0A0B4J1G9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv5A0A0B4J1G9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv5A0A0B4J1G9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbv5A0A0B4J1G9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trbv5A0A0B4J1G9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.53■□□□□ 0.24
Trbv5A0A0B4J1G9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv5A0A0B4J1G9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv5A0A0B4J1G9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv5A0A0B4J1G9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv5A0A0B4J1G9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv5A0A0B4J1G9 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.52■□□□□ 0.24
Trbv5A0A0B4J1G9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv5A0A0B4J1G9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv5A0A0B4J1G9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv5A0A0B4J1G9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trbv5A0A0B4J1G9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv5A0A0B4J1G9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trbv5A0A0B4J1G9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv5A0A0B4J1G9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv5A0A0B4J1G9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv5A0A0B4J1G9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv5A0A0B4J1G9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.52■□□□□ 0.23
Trbv5A0A0B4J1G9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv5A0A0B4J1G9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv5A0A0B4J1G9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv5A0A0B4J1G9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv5A0A0B4J1G9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv5A0A0B4J1G9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms