Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.74■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.74■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.74■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Gm14117-201ENSMUST00000122417 843 ntBASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.71■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.71■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-52A0A0A6YXC3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.71■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.71■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.7■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.7■□□□□ 0.1
Ighv1-52A0A0A6YXC3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.7■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.69■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.69■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.68■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.68■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.68■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.68■□□□□ 0.1
Ighv1-52A0A0A6YXC3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.68■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.67■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.66■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-52A0A0A6YXC3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.66■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-52A0A0A6YXC3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms