Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-9A0A0A6YW37 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-9A0A0A6YW37 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-9A0A0A6YW37 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-9A0A0A6YW37 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-9A0A0A6YW37 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-9A0A0A6YW37 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-9A0A0A6YW37 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-9A0A0A6YW37 Notumos-201ENSMUST00000151998 2659 ntBASIC15.52■□□□□ 0.07
Ighv1-9A0A0A6YW37 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-9A0A0A6YW37 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-9A0A0A6YW37 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-9A0A0A6YW37 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.51■□□□□ 0.07
Ighv1-9A0A0A6YW37 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-9A0A0A6YW37 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.51■□□□□ 0.07
Ighv1-9A0A0A6YW37 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-9A0A0A6YW37 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-9A0A0A6YW37 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-9A0A0A6YW37 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-9A0A0A6YW37 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ighv1-9A0A0A6YW37 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Ighv1-9A0A0A6YW37 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-9A0A0A6YW37 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-9A0A0A6YW37 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-9A0A0A6YW37 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-9A0A0A6YW37 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-9A0A0A6YW37 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-9A0A0A6YW37 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-9A0A0A6YW37 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-9A0A0A6YW37 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-9A0A0A6YW37 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-9A0A0A6YW37 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-9A0A0A6YW37 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-9A0A0A6YW37 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ighv1-9A0A0A6YW37 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-9A0A0A6YW37 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-9A0A0A6YW37 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-9A0A0A6YW37 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv1-9A0A0A6YW37 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-9A0A0A6YW37 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-9A0A0A6YW37 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Ighv1-9A0A0A6YW37 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-9A0A0A6YW37 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.45■□□□□ 0.06
Ighv1-9A0A0A6YW37 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.45■□□□□ 0.06
Ighv1-9A0A0A6YW37 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-9A0A0A6YW37 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Ighv1-9A0A0A6YW37 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.45■□□□□ 0.06
Ighv1-9A0A0A6YW37 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-9A0A0A6YW37 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-9A0A0A6YW37 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms