Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav21-dv12A0A075B6C4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav21-dv12A0A075B6C4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav21-dv12A0A075B6C4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav21-dv12A0A075B6C4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav21-dv12A0A075B6C4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav21-dv12A0A075B6C4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav21-dv12A0A075B6C4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav21-dv12A0A075B6C4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav21-dv12A0A075B6C4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav21-dv12A0A075B6C4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav21-dv12A0A075B6C4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav21-dv12A0A075B6C4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav21-dv12A0A075B6C4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav21-dv12A0A075B6C4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav21-dv12A0A075B6C4 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.83■□□□□ 0.12
Trav21-dv12A0A075B6C4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav21-dv12A0A075B6C4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav21-dv12A0A075B6C4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav21-dv12A0A075B6C4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav21-dv12A0A075B6C4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav21-dv12A0A075B6C4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav21-dv12A0A075B6C4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav21-dv12A0A075B6C4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav21-dv12A0A075B6C4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav21-dv12A0A075B6C4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav21-dv12A0A075B6C4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav21-dv12A0A075B6C4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav21-dv12A0A075B6C4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav21-dv12A0A075B6C4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.8■□□□□ 0.12
Trav21-dv12A0A075B6C4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav21-dv12A0A075B6C4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav21-dv12A0A075B6C4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trav21-dv12A0A075B6C4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav21-dv12A0A075B6C4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav21-dv12A0A075B6C4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav21-dv12A0A075B6C4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav21-dv12A0A075B6C4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav21-dv12A0A075B6C4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav21-dv12A0A075B6C4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav21-dv12A0A075B6C4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav21-dv12A0A075B6C4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav21-dv12A0A075B6C4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav21-dv12A0A075B6C4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav21-dv12A0A075B6C4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav21-dv12A0A075B6C4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
Trav21-dv12A0A075B6C4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav21-dv12A0A075B6C4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav21-dv12A0A075B6C4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav21-dv12A0A075B6C4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav21-dv12A0A075B6C4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav21-dv12A0A075B6C4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav21-dv12A0A075B6C4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav21-dv12A0A075B6C4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav21-dv12A0A075B6C4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.77■□□□□ 0.12
Trav21-dv12A0A075B6C4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav21-dv12A0A075B6C4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav21-dv12A0A075B6C4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav21-dv12A0A075B6C4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav21-dv12A0A075B6C4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav21-dv12A0A075B6C4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trav21-dv12A0A075B6C4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav21-dv12A0A075B6C4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav21-dv12A0A075B6C4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav21-dv12A0A075B6C4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav21-dv12A0A075B6C4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.76■□□□□ 0.11
Trav21-dv12A0A075B6C4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav21-dv12A0A075B6C4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav21-dv12A0A075B6C4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav21-dv12A0A075B6C4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav21-dv12A0A075B6C4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav21-dv12A0A075B6C4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav21-dv12A0A075B6C4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm45444-201ENSMUST00000211394 898 ntBASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav21-dv12A0A075B6C4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms