Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.15□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-4-dv7A0A075B6C2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav13-4-dv7A0A075B6C2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms