Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-4A0A075B6B4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav6-4A0A075B6B4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav6-4A0A075B6B4 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.9■□□□□ 0.14
Trav6-4A0A075B6B4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav6-4A0A075B6B4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-4A0A075B6B4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-4A0A075B6B4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-4A0A075B6B4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-4A0A075B6B4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav6-4A0A075B6B4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav6-4A0A075B6B4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-4A0A075B6B4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-4A0A075B6B4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav6-4A0A075B6B4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-4A0A075B6B4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-4A0A075B6B4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav6-4A0A075B6B4 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.89■□□□□ 0.13
Trav6-4A0A075B6B4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-4A0A075B6B4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.89■□□□□ 0.13
Trav6-4A0A075B6B4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav6-4A0A075B6B4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-4A0A075B6B4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Etf1-202ENSMUST00000180351 108 ntBASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-4A0A075B6B4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Gm7417-201ENSMUST00000192950 473 ntBASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-4A0A075B6B4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-4A0A075B6B4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-4A0A075B6B4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-4A0A075B6B4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-4A0A075B6B4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-4A0A075B6B4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav6-4A0A075B6B4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-4A0A075B6B4 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.85■□□□□ 0.13
Trav6-4A0A075B6B4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-4A0A075B6B4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-4A0A075B6B4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-4A0A075B6B4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Rps24-207ENSMUST00000224568 714 ntBASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Gm9959-201ENSMUST00000068277 390 ntBASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-4A0A075B6B4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.83■□□□□ 0.13
Trav6-4A0A075B6B4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-4A0A075B6B4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-4A0A075B6B4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-4A0A075B6B4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-4A0A075B6B4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-4A0A075B6B4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-4A0A075B6B4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-4A0A075B6B4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-4A0A075B6B4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms