Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-6A0A075B6B2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-6A0A075B6B2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-6A0A075B6B2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-6A0A075B6B2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-6A0A075B6B2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-6A0A075B6B2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-6A0A075B6B2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-6A0A075B6B2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-6A0A075B6B2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Trav6n-6A0A075B6B2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-6A0A075B6B2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-6A0A075B6B2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-6A0A075B6B2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-6A0A075B6B2 Gm22567-201ENSMUST00000175542 342 ntBASIC15.25■□□□□ 0.03
Trav6n-6A0A075B6B2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-6A0A075B6B2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-6A0A075B6B2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-6A0A075B6B2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-6A0A075B6B2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-6A0A075B6B2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-6A0A075B6B2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-6A0A075B6B2 Gm10420-201ENSMUST00000121713 882 ntBASIC15.24■□□□□ 0.03
Trav6n-6A0A075B6B2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-6A0A075B6B2 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.24■□□□□ 0.03
Trav6n-6A0A075B6B2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-6A0A075B6B2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-6A0A075B6B2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-6A0A075B6B2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-6A0A075B6B2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-6A0A075B6B2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-6A0A075B6B2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-6A0A075B6B2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-6A0A075B6B2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-6A0A075B6B2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-6A0A075B6B2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-6A0A075B6B2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.22■□□□□ 0.03
Trav6n-6A0A075B6B2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-6A0A075B6B2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-6A0A075B6B2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-6A0A075B6B2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-6A0A075B6B2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-6A0A075B6B2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-6A0A075B6B2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-6A0A075B6B2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav6n-6A0A075B6B2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav6n-6A0A075B6B2 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.21■□□□□ 0.03
Trav6n-6A0A075B6B2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav6n-6A0A075B6B2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-6A0A075B6B2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-6A0A075B6B2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-6A0A075B6B2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-6A0A075B6B2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-6A0A075B6B2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-6A0A075B6B2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav6n-6A0A075B6B2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-6A0A075B6B2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-6A0A075B6B2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-6A0A075B6B2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav6n-6A0A075B6B2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-6A0A075B6B2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-6A0A075B6B2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-6A0A075B6B2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms