Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav6n-7A0A075B6A6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-7A0A075B6A6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trav6n-7A0A075B6A6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6n-7A0A075B6A6 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.53■□□□□ 0.4
Trav6n-7A0A075B6A6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6n-7A0A075B6A6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6n-7A0A075B6A6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav6n-7A0A075B6A6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav6n-7A0A075B6A6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6n-7A0A075B6A6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6n-7A0A075B6A6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6n-7A0A075B6A6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6n-7A0A075B6A6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6n-7A0A075B6A6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.52■□□□□ 0.4
Trav6n-7A0A075B6A6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav6n-7A0A075B6A6 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.52■□□□□ 0.39
Trav6n-7A0A075B6A6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6n-7A0A075B6A6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6n-7A0A075B6A6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6n-7A0A075B6A6 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.51■□□□□ 0.39
Trav6n-7A0A075B6A6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav6n-7A0A075B6A6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-7A0A075B6A6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6n-7A0A075B6A6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6n-7A0A075B6A6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms