Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav12d-3A0A075B6A4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-3A0A075B6A4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-3A0A075B6A4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-3A0A075B6A4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-3A0A075B6A4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-3A0A075B6A4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Trav12d-3A0A075B6A4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-3A0A075B6A4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-3A0A075B6A4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-3A0A075B6A4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trav12d-3A0A075B6A4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-3A0A075B6A4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-3A0A075B6A4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-3A0A075B6A4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.46■□□□□ 0.07
Trav12d-3A0A075B6A4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav12d-3A0A075B6A4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-3A0A075B6A4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav12d-3A0A075B6A4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-3A0A075B6A4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-3A0A075B6A4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-3A0A075B6A4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-3A0A075B6A4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-3A0A075B6A4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-3A0A075B6A4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-3A0A075B6A4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-3A0A075B6A4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-3A0A075B6A4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-3A0A075B6A4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12d-3A0A075B6A4 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.4■□□□□ 0.06
Trav12d-3A0A075B6A4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12d-3A0A075B6A4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav12d-3A0A075B6A4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-3A0A075B6A4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-3A0A075B6A4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-3A0A075B6A4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.39■□□□□ 0.05
Trav12d-3A0A075B6A4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-3A0A075B6A4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Trav12d-3A0A075B6A4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav12d-3A0A075B6A4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-3A0A075B6A4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
Trav12d-3A0A075B6A4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms