Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-1A0A075B699 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-1A0A075B699 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav9d-1A0A075B699 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-1A0A075B699 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-1A0A075B699 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-1A0A075B699 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-1A0A075B699 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-1A0A075B699 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-1A0A075B699 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9d-1A0A075B699 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9d-1A0A075B699 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9d-1A0A075B699 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9d-1A0A075B699 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9d-1A0A075B699 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9d-1A0A075B699 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9d-1A0A075B699 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9d-1A0A075B699 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.87■□□□□ 0.13
Trav9d-1A0A075B699 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9d-1A0A075B699 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9d-1A0A075B699 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9d-1A0A075B699 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9d-1A0A075B699 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Trav9d-1A0A075B699 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9d-1A0A075B699 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9d-1A0A075B699 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav9d-1A0A075B699 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav9d-1A0A075B699 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9d-1A0A075B699 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9d-1A0A075B699 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9d-1A0A075B699 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9d-1A0A075B699 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav9d-1A0A075B699 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9d-1A0A075B699 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-1A0A075B699 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav9d-1A0A075B699 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
Trav9d-1A0A075B699 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Trav9d-1A0A075B699 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav9d-1A0A075B699 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav9d-1A0A075B699 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Trav9d-1A0A075B699 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9d-1A0A075B699 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9d-1A0A075B699 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav9d-1A0A075B699 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.83■□□□□ 0.12
Trav9d-1A0A075B699 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Trav9d-1A0A075B699 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9d-1A0A075B699 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9d-1A0A075B699 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9d-1A0A075B699 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9d-1A0A075B699 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9d-1A0A075B699 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Notumos-201ENSMUST00000151998 2659 ntBASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-1A0A075B699 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-1A0A075B699 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-1A0A075B699 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-1A0A075B699 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-1A0A075B699 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.81■□□□□ 0.12
Trav9d-1A0A075B699 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-1A0A075B699 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-1A0A075B699 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-1A0A075B699 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-1A0A075B699 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms