Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav18A0A075B656 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav18A0A075B656 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav18A0A075B656 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav18A0A075B656 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav18A0A075B656 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav18A0A075B656 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav18A0A075B656 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav18A0A075B656 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav18A0A075B656 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav18A0A075B656 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav18A0A075B656 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav18A0A075B656 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav18A0A075B656 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Trav18A0A075B656 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.89■□□□□ 0.29
Trav18A0A075B656 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.89■□□□□ 0.29
Trav18A0A075B656 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.89■□□□□ 0.29
Trav18A0A075B656 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Trav18A0A075B656 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav18A0A075B656 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.89■□□□□ 0.29
Trav18A0A075B656 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav18A0A075B656 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav18A0A075B656 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav18A0A075B656 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav18A0A075B656 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.88■□□□□ 0.29
Trav18A0A075B656 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Trav18A0A075B656 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav18A0A075B656 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav18A0A075B656 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.87■□□□□ 0.29
Trav18A0A075B656 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav18A0A075B656 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.87■□□□□ 0.29
Trav18A0A075B656 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trav18A0A075B656 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav18A0A075B656 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav18A0A075B656 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav18A0A075B656 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav18A0A075B656 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav18A0A075B656 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav18A0A075B656 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav18A0A075B656 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav18A0A075B656 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav18A0A075B656 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.85■□□□□ 0.29
Trav18A0A075B656 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav18A0A075B656 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav18A0A075B656 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav18A0A075B656 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav18A0A075B656 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav18A0A075B656 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.83■□□□□ 0.29
Trav18A0A075B656 Notumos-201ENSMUST00000151998 2659 ntBASIC16.83■□□□□ 0.28
Trav18A0A075B656 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav18A0A075B656 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav18A0A075B656 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav18A0A075B656 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav18A0A075B656 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav18A0A075B656 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav18A0A075B656 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav18A0A075B656 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav18A0A075B656 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav18A0A075B656 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav18A0A075B656 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms