Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16A0A075B653 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav16A0A075B653 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16A0A075B653 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16A0A075B653 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16A0A075B653 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16A0A075B653 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav16A0A075B653 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav16A0A075B653 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16A0A075B653 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16A0A075B653 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16A0A075B653 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16A0A075B653 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16A0A075B653 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16A0A075B653 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16A0A075B653 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16A0A075B653 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16A0A075B653 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16A0A075B653 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav16A0A075B653 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16A0A075B653 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16A0A075B653 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16A0A075B653 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16A0A075B653 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16A0A075B653 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16A0A075B653 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16A0A075B653 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16A0A075B653 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16A0A075B653 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.86■□□□□ 0.13
Trav16A0A075B653 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16A0A075B653 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav16A0A075B653 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.85■□□□□ 0.13
Trav16A0A075B653 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.85■□□□□ 0.13
Trav16A0A075B653 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16A0A075B653 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16A0A075B653 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16A0A075B653 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav16A0A075B653 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav16A0A075B653 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav16A0A075B653 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16A0A075B653 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16A0A075B653 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16A0A075B653 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16A0A075B653 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav16A0A075B653 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.84■□□□□ 0.13
Trav16A0A075B653 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav16A0A075B653 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.84■□□□□ 0.13
Trav16A0A075B653 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav16A0A075B653 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav16A0A075B653 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav16A0A075B653 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav16A0A075B653 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav16A0A075B653 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav16A0A075B653 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
Trav16A0A075B653 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav16A0A075B653 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav16A0A075B653 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav16A0A075B653 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav16A0A075B653 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav16A0A075B653 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav16A0A075B653 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav16A0A075B653 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav16A0A075B653 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.83■□□□□ 0.12
Trav16A0A075B653 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16A0A075B653 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16A0A075B653 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16A0A075B653 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16A0A075B653 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16A0A075B653 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16A0A075B653 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16A0A075B653 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16A0A075B653 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16A0A075B653 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav16A0A075B653 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav16A0A075B653 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16A0A075B653 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav16A0A075B653 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16A0A075B653 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trav16A0A075B653 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16A0A075B653 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Trav16A0A075B653 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.8■□□□□ 0.12
Trav16A0A075B653 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16A0A075B653 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16A0A075B653 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16A0A075B653 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16A0A075B653 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16A0A075B653 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav16A0A075B653 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms