Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-4-dv10A0A075B651 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav4-4-dv10A0A075B651 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-4-dv10A0A075B651 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-4-dv10A0A075B651 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-4-dv10A0A075B651 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-4-dv10A0A075B651 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-4-dv10A0A075B651 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-4-dv10A0A075B651 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-4-dv10A0A075B651 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-4-dv10A0A075B651 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-4-dv10A0A075B651 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-4-dv10A0A075B651 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-4-dv10A0A075B651 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav4-4-dv10A0A075B651 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-4-dv10A0A075B651 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-4-dv10A0A075B651 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-4-dv10A0A075B651 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav4-4-dv10A0A075B651 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.09■□□□□ 0.17
Trav4-4-dv10A0A075B651 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4-4-dv10A0A075B651 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.09■□□□□ 0.17
Trav4-4-dv10A0A075B651 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4-4-dv10A0A075B651 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4-4-dv10A0A075B651 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4-4-dv10A0A075B651 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.09■□□□□ 0.17
Trav4-4-dv10A0A075B651 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav4-4-dv10A0A075B651 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4-4-dv10A0A075B651 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4-4-dv10A0A075B651 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav4-4-dv10A0A075B651 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4-4-dv10A0A075B651 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4-4-dv10A0A075B651 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4-4-dv10A0A075B651 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4-4-dv10A0A075B651 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4-4-dv10A0A075B651 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4-4-dv10A0A075B651 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4-4-dv10A0A075B651 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4-4-dv10A0A075B651 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav4-4-dv10A0A075B651 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4-4-dv10A0A075B651 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4-4-dv10A0A075B651 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav4-4-dv10A0A075B651 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4-4-dv10A0A075B651 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav4-4-dv10A0A075B651 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4-4-dv10A0A075B651 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4-4-dv10A0A075B651 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4-4-dv10A0A075B651 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav4-4-dv10A0A075B651 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4-4-dv10A0A075B651 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav4-4-dv10A0A075B651 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-4-dv10A0A075B651 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.04■□□□□ 0.16
Trav4-4-dv10A0A075B651 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav4-4-dv10A0A075B651 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-4-dv10A0A075B651 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-4-dv10A0A075B651 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-4-dv10A0A075B651 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-4-dv10A0A075B651 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-4-dv10A0A075B651 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav4-4-dv10A0A075B651 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-4-dv10A0A075B651 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-4-dv10A0A075B651 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-4-dv10A0A075B651 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav4-4-dv10A0A075B651 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav4-4-dv10A0A075B651 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.02■□□□□ 0.16
Trav4-4-dv10A0A075B651 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav4-4-dv10A0A075B651 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav4-4-dv10A0A075B651 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav4-4-dv10A0A075B651 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 190.9 ms