Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav12-3A0A075B648 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav12-3A0A075B648 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav12-3A0A075B648 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav12-3A0A075B648 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav12-3A0A075B648 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.08■□□□□ 0
Trav12-3A0A075B648 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12-3A0A075B648 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12-3A0A075B648 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12-3A0A075B648 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav12-3A0A075B648 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav12-3A0A075B648 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-3A0A075B648 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-3A0A075B648 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-3A0A075B648 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.06■□□□□ 0
Trav12-3A0A075B648 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-3A0A075B648 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-3A0A075B648 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav12-3A0A075B648 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav12-3A0A075B648 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-3A0A075B648 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-3A0A075B648 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-3A0A075B648 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav12-3A0A075B648 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-3A0A075B648 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav12-3A0A075B648 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav12-3A0A075B648 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav12-3A0A075B648 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.05■□□□□ 0
Trav12-3A0A075B648 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12-3A0A075B648 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12-3A0A075B648 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.05■□□□□ -0
Trav12-3A0A075B648 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12-3A0A075B648 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-3A0A075B648 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-3A0A075B648 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-3A0A075B648 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav12-3A0A075B648 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.04■□□□□ -0
Trav12-3A0A075B648 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-3A0A075B648 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-3A0A075B648 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.03■□□□□ -0
Trav12-3A0A075B648 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-3A0A075B648 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12-3A0A075B648 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.02■□□□□ -0
Trav12-3A0A075B648 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav12-3A0A075B648 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12-3A0A075B648 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav12-3A0A075B648 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12-3A0A075B648 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12-3A0A075B648 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav12-3A0A075B648 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-3A0A075B648 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-3A0A075B648 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-3A0A075B648 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav12-3A0A075B648 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-3A0A075B648 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav12-3A0A075B648 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-3A0A075B648 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-3A0A075B648 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-3A0A075B648 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-3A0A075B648 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-3A0A075B648 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-3A0A075B648 Gm5987-201ENSMUST00000196433 1151 ntBASIC15□□□□□ -0.01
Trav12-3A0A075B648 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-3A0A075B648 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-3A0A075B648 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-3A0A075B648 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms