Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Gm22238-201ENSMUST00000175222 88 ntBASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-1A0A075B644 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-1A0A075B644 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-1A0A075B644 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-1A0A075B644 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav13-1A0A075B644 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-1A0A075B644 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-1A0A075B644 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-1A0A075B644 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-1A0A075B644 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-1A0A075B644 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-1A0A075B644 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-1A0A075B644 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-1A0A075B644 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-1A0A075B644 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-1A0A075B644 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-1A0A075B644 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav13-1A0A075B644 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-1A0A075B644 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-1A0A075B644 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-1A0A075B644 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-1A0A075B644 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.56□□□□□ -0.08
Trav13-1A0A075B644 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav13-1A0A075B644 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-1A0A075B644 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav13-1A0A075B644 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-1A0A075B644 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-1A0A075B644 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav13-1A0A075B644 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-1A0A075B644 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-1A0A075B644 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-1A0A075B644 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-1A0A075B644 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms