Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-7-dv9A0A075B639 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-7-dv9A0A075B639 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-7-dv9A0A075B639 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-7-dv9A0A075B639 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-7-dv9A0A075B639 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-7-dv9A0A075B639 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-7-dv9A0A075B639 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trav6-7-dv9A0A075B639 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-7-dv9A0A075B639 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-7-dv9A0A075B639 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-7-dv9A0A075B639 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6-7-dv9A0A075B639 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6-7-dv9A0A075B639 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-7-dv9A0A075B639 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-7-dv9A0A075B639 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-7-dv9A0A075B639 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.33■□□□□ 0.52
Trav6-7-dv9A0A075B639 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trav6-7-dv9A0A075B639 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
Trav6-7-dv9A0A075B639 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-7-dv9A0A075B639 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-7-dv9A0A075B639 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-7-dv9A0A075B639 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-7-dv9A0A075B639 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-7-dv9A0A075B639 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-7-dv9A0A075B639 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-7-dv9A0A075B639 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Trav6-7-dv9A0A075B639 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-7-dv9A0A075B639 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-7-dv9A0A075B639 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav6-7-dv9A0A075B639 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-7-dv9A0A075B639 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trav6-7-dv9A0A075B639 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-7-dv9A0A075B639 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-7-dv9A0A075B639 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-7-dv9A0A075B639 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-7-dv9A0A075B639 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-7-dv9A0A075B639 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-7-dv9A0A075B639 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trav6-7-dv9A0A075B639 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-7-dv9A0A075B639 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-7-dv9A0A075B639 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-7-dv9A0A075B639 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-7-dv9A0A075B639 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-7-dv9A0A075B639 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-7-dv9A0A075B639 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-7-dv9A0A075B639 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-7-dv9A0A075B639 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-7-dv9A0A075B639 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-7-dv9A0A075B639 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.3■□□□□ 0.52
Trav6-7-dv9A0A075B639 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-7-dv9A0A075B639 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-7-dv9A0A075B639 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trav6-7-dv9A0A075B639 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Trav6-7-dv9A0A075B639 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-7-dv9A0A075B639 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-7-dv9A0A075B639 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-7-dv9A0A075B639 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.29■□□□□ 0.52
Trav6-7-dv9A0A075B639 Gm13238-201ENSMUST00000117655 780 ntBASIC18.29■□□□□ 0.52
Trav6-7-dv9A0A075B639 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.29■□□□□ 0.52
Trav6-7-dv9A0A075B639 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trav6-7-dv9A0A075B639 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-7-dv9A0A075B639 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-7-dv9A0A075B639 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.29■□□□□ 0.52
Trav6-7-dv9A0A075B639 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-7-dv9A0A075B639 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-7-dv9A0A075B639 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-7-dv9A0A075B639 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-7-dv9A0A075B639 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trav6-7-dv9A0A075B639 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav6-7-dv9A0A075B639 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-7-dv9A0A075B639 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.27■□□□□ 0.52
Trav6-7-dv9A0A075B639 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-7-dv9A0A075B639 Gm10399-202ENSMUST00000202768 748 ntBASIC18.27■□□□□ 0.52
Trav6-7-dv9A0A075B639 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-7-dv9A0A075B639 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-7-dv9A0A075B639 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-7-dv9A0A075B639 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-7-dv9A0A075B639 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.27■□□□□ 0.52
Trav6-7-dv9A0A075B639 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.27■□□□□ 0.51
Trav6-7-dv9A0A075B639 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav6-7-dv9A0A075B639 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-7-dv9A0A075B639 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-7-dv9A0A075B639 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-7-dv9A0A075B639 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.26■□□□□ 0.51
Trav6-7-dv9A0A075B639 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-7-dv9A0A075B639 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-7-dv9A0A075B639 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-7-dv9A0A075B639 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-7-dv9A0A075B639 Gm10232-201ENSMUST00000089221 720 ntBASIC18.25■□□□□ 0.51
Trav6-7-dv9A0A075B639 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-7-dv9A0A075B639 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-7-dv9A0A075B639 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-7-dv9A0A075B639 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-7-dv9A0A075B639 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms