Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav16nA0A075B634 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav16nA0A075B634 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Gm6311-201ENSMUST00000073790 878 ntBASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav16nA0A075B634 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav16nA0A075B634 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav16nA0A075B634 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav16nA0A075B634 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav16nA0A075B634 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav16nA0A075B634 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav16nA0A075B634 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav16nA0A075B634 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav16nA0A075B634 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav16nA0A075B634 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav16nA0A075B634 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav16nA0A075B634 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav16nA0A075B634 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16nA0A075B634 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav16nA0A075B634 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16nA0A075B634 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16nA0A075B634 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16nA0A075B634 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16nA0A075B634 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav16nA0A075B634 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav16nA0A075B634 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav16nA0A075B634 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav16nA0A075B634 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16nA0A075B634 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav16nA0A075B634 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms