Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.5■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Trav15d-1-dv6d-1A0A075B624 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.45■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms