Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Golph3-202ENSMUST00000226517 2359 ntBASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16d-dv11A0A075B617 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16d-dv11A0A075B617 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16d-dv11A0A075B617 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16d-dv11A0A075B617 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16d-dv11A0A075B617 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16d-dv11A0A075B617 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16d-dv11A0A075B617 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav16d-dv11A0A075B617 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav16d-dv11A0A075B617 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav16d-dv11A0A075B617 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16d-dv11A0A075B617 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16d-dv11A0A075B617 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav16d-dv11A0A075B617 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trav16d-dv11A0A075B617 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16d-dv11A0A075B617 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav16d-dv11A0A075B617 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16d-dv11A0A075B617 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav16d-dv11A0A075B617 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16d-dv11A0A075B617 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16d-dv11A0A075B617 Gm45364-201ENSMUST00000210883 159 ntBASIC15.06■□□□□ 0
Trav16d-dv11A0A075B617 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16d-dv11A0A075B617 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.06■□□□□ 0
Trav16d-dv11A0A075B617 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16d-dv11A0A075B617 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16d-dv11A0A075B617 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16d-dv11A0A075B617 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav16d-dv11A0A075B617 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav16d-dv11A0A075B617 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav16d-dv11A0A075B617 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav16d-dv11A0A075B617 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms