Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm24255-201ENSMUST00000104481 128 ntBASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm18893-201ENSMUST00000198416 943 ntBASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm3961-201ENSMUST00000204425 994 ntBASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.01□□□□□ -0.49
H2afb2S4R1M3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb2S4R1M3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
H2afb2S4R1M3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
H2afb2S4R1M3 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12□□□□□ -0.49
H2afb2S4R1M3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Gm14381-201ENSMUST00000122105 414 ntBASIC12□□□□□ -0.49
H2afb2S4R1M3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12□□□□□ -0.49
H2afb2S4R1M3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Gm43822-201ENSMUST00000200285 476 ntBASIC12□□□□□ -0.49
H2afb2S4R1M3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12□□□□□ -0.49
H2afb2S4R1M3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Gm18615-201ENSMUST00000222919 1031 ntBASIC12□□□□□ -0.49
H2afb2S4R1M3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12□□□□□ -0.49
H2afb2S4R1M3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
H2afb2S4R1M3 Gm6015-201ENSMUST00000217493 1586 ntBASIC12□□□□□ -0.49
H2afb2S4R1M3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
H2afb2S4R1M3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb2S4R1M3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12□□□□□ -0.49
H2afb2S4R1M3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Gm14723-201ENSMUST00000118686 215 ntBASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Gm43758-201ENSMUST00000199500 367 ntBASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Gm45598-202ENSMUST00000210719 986 ntBASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb2S4R1M3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms