Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Upk1bQ9Z2C6 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gm11439-201ENSMUST00000118598 409 ntBASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gm8515-201ENSMUST00000194852 576 ntBASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gm42693-201ENSMUST00000196779 631 ntBASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1bQ9Z2C6 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.09□□□□□ -0.63
Upk1bQ9Z2C6 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms