Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Gm14723-201ENSMUST00000118686 215 ntBASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Gm43822-201ENSMUST00000200285 476 ntBASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Gm3961-201ENSMUST00000204425 994 ntBASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Gm8712-201ENSMUST00000221090 701 ntBASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.11□□□□□ -0.63
ClcnkaQ9WUB7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Gm38341-201ENSMUST00000195357 515 ntBASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Gm9996-201ENSMUST00000070359 913 ntBASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Gm10312-201ENSMUST00000078515 489 ntBASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Olfr582-201ENSMUST00000098212 960 ntBASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
ClcnkaQ9WUB7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.09□□□□□ -0.63
ClcnkaQ9WUB7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 188.6 ms