Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf4Q9QZS2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Gm13315-201ENSMUST00000120376 991 ntBASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Gm15321-201ENSMUST00000121290 288 ntBASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Gm44958-201ENSMUST00000203734 736 ntBASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf4Q9QZS2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Gm2231-201ENSMUST00000125661 612 ntBASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Mir7654-201ENSMUST00000185082 70 ntBASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Gm37922-201ENSMUST00000195596 455 ntBASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf4Q9QZS2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms