Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd1Q9D0E3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Gm24140-201ENSMUST00000122773 326 ntBASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Gm5194-201ENSMUST00000221457 742 ntBASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd1Q9D0E3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Map1b-203ENSMUST00000223725 2669 ntBASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Gm6946-201ENSMUST00000182237 987 ntBASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.71□□□□□ -0.37
Lysmd1Q9D0E3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Lysmd1Q9D0E3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd1Q9D0E3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd1Q9D0E3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.71□□□□□ -0.38
Lysmd1Q9D0E3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.7□□□□□ -0.38
Lysmd1Q9D0E3 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms