Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Gm12314-201ENSMUST00000118104 538 ntBASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Gm9136-201ENSMUST00000193368 454 ntBASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Gm13226-201ENSMUST00000117838 404 ntBASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Gm7809-201ENSMUST00000153199 742 ntBASIC11.79□□□□□ -0.52
Trim8Q99PJ2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Gm42937-201ENSMUST00000197360 752 ntBASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim8Q99PJ2 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.78□□□□□ -0.52
Trim8Q99PJ2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms