Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm12579-201ENSMUST00000118040 783 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm8731-201ENSMUST00000118088 412 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm20392-201ENSMUST00000173047 701 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm8815-201ENSMUST00000173809 620 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm18711-201ENSMUST00000199341 750 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm45594-201ENSMUST00000211717 241 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm9139-201ENSMUST00000218817 700 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Gm24398-201ENSMUST00000157870 109 ntBASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Gm3551-201ENSMUST00000190750 664 ntBASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Gm43778-201ENSMUST00000199438 199 ntBASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Gm9111-201ENSMUST00000219394 709 ntBASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-1Q99MA9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm25076-201ENSMUST00000104098 132 ntBASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm21092-201ENSMUST00000178995 955 ntBASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm8531-201ENSMUST00000188319 893 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms