Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Lgi3-203ENSMUST00000226548 1001 ntBASIC14.79□□□□□ -0.04
RtcbQ99LF4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC14.79□□□□□ -0.04
RtcbQ99LF4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.78□□□□□ -0.04
RtcbQ99LF4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Gm11244-201ENSMUST00000121243 237 ntBASIC14.78□□□□□ -0.04
RtcbQ99LF4 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC14.78□□□□□ -0.04
RtcbQ99LF4 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Gm19640-201ENSMUST00000214849 464 ntBASIC14.78□□□□□ -0.04
RtcbQ99LF4 Gm18514-201ENSMUST00000218980 436 ntBASIC14.78□□□□□ -0.04
RtcbQ99LF4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RtcbQ99LF4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RtcbQ99LF4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RtcbQ99LF4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RtcbQ99LF4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RtcbQ99LF4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RtcbQ99LF4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.04
RtcbQ99LF4 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.77□□□□□ -0.04
RtcbQ99LF4 Gm43334-201ENSMUST00000197740 1318 ntBASIC14.77□□□□□ -0.04
RtcbQ99LF4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
RtcbQ99LF4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RtcbQ99LF4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RtcbQ99LF4 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm11434-201ENSMUST00000122379 629 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm28937-201ENSMUST00000185413 695 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm29400-201ENSMUST00000187208 695 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm28662-201ENSMUST00000188446 695 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm28251-201ENSMUST00000188835 695 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm37318-201ENSMUST00000194325 695 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm38017-201ENSMUST00000194768 695 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm37826-201ENSMUST00000195329 322 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm37287-201ENSMUST00000195449 695 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm37793-201ENSMUST00000195548 695 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm42816-201ENSMUST00000198433 325 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm18204-201ENSMUST00000209835 793 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Mt1-202ENSMUST00000211807 1085 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RtcbQ99LF4 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.77□□□□□ -0.05
RtcbQ99LF4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RtcbQ99LF4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RtcbQ99LF4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RtcbQ99LF4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RtcbQ99LF4 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RtcbQ99LF4 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RtcbQ99LF4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RtcbQ99LF4 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.76□□□□□ -0.05
RtcbQ99LF4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RtcbQ99LF4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RtcbQ99LF4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RtcbQ99LF4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RtcbQ99LF4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RtcbQ99LF4 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.76□□□□□ -0.05
RtcbQ99LF4 Gm15036-201ENSMUST00000118880 400 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms