Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Gm8652-201ENSMUST00000181363 964 ntBASIC12.11□□□□□ -0.47
Cdk9Q99J95 Gm9022-201ENSMUST00000182482 992 ntBASIC12.11□□□□□ -0.47
Cdk9Q99J95 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.11□□□□□ -0.47
Cdk9Q99J95 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk9Q99J95 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Gm27331-201ENSMUST00000183705 60 ntBASIC12.1□□□□□ -0.47
Cdk9Q99J95 Gm37497-201ENSMUST00000195830 798 ntBASIC12.1□□□□□ -0.47
Cdk9Q99J95 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Gm4768-201ENSMUST00000206199 686 ntBASIC12.1□□□□□ -0.47
Cdk9Q99J95 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdk9Q99J95 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.09□□□□□ -0.47
Cdk9Q99J95 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Gm13369-201ENSMUST00000119442 987 ntBASIC12.09□□□□□ -0.47
Cdk9Q99J95 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Gm4034-201ENSMUST00000187674 480 ntBASIC12.09□□□□□ -0.47
Cdk9Q99J95 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.09□□□□□ -0.47
Cdk9Q99J95 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.09□□□□□ -0.47
Cdk9Q99J95 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms