Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Gm17827-201ENSMUST00000211825 742 ntBASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga6Q91XY2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Gm39404-201ENSMUST00000216350 313 ntBASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Mir339-201ENSMUST00000083659 96 ntBASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga6Q91XY2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms