Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx41Q91VN6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ddx41Q91VN6 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
Ddx41Q91VN6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ddx41Q91VN6 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ddx41Q91VN6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ddx41Q91VN6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ddx41Q91VN6 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ddx41Q91VN6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.83□□□□□ -0.19
Ddx41Q91VN6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ddx41Q91VN6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ddx41Q91VN6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ddx41Q91VN6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Gm19994-201ENSMUST00000217086 586 ntBASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Gm9996-201ENSMUST00000070359 913 ntBASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx41Q91VN6 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Gm17040-202ENSMUST00000170597 889 ntBASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms