Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm8018-201ENSMUST00000173536 789 ntBASIC10.33□□□□□ -0.76
Tram1Q91V04 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Tram1Q91V04 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Gm37497-201ENSMUST00000195830 798 ntBASIC10.33□□□□□ -0.76
Tram1Q91V04 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.33□□□□□ -0.76
Tram1Q91V04 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.33□□□□□ -0.76
Tram1Q91V04 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Tram1Q91V04 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Tram1Q91V04 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.33□□□□□ -0.76
Tram1Q91V04 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.33□□□□□ -0.76
Tram1Q91V04 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tram1Q91V04 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.32□□□□□ -0.76
Tram1Q91V04 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Tram1Q91V04 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm12314-201ENSMUST00000118104 538 ntBASIC10.32□□□□□ -0.76
Tram1Q91V04 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm11597-201ENSMUST00000121423 964 ntBASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.32□□□□□ -0.76
Tram1Q91V04 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm2495-201ENSMUST00000191160 466 ntBASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.32□□□□□ -0.76
Tram1Q91V04 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm45930-201ENSMUST00000221330 292 ntBASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm19163-201ENSMUST00000223313 780 ntBASIC10.32□□□□□ -0.76
Tram1Q91V04 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.32□□□□□ -0.76
Tram1Q91V04 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Tram1Q91V04 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Tram1Q91V04 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tram1Q91V04 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Tram1Q91V04 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Tram1Q91V04 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tram1Q91V04 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tram1Q91V04 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tram1Q91V04 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tram1Q91V04 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tram1Q91V04 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tram1Q91V04 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms