Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm8152-201ENSMUST00000120842 637 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Olfml3-204ENSMUST00000169286 874 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Gm18733-202ENSMUST00000174447 401 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Gm25580-201ENSMUST00000083409 327 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 AC154354.1-203ENSMUST00000225565 1364 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 AC159810.1-201ENSMUST00000214838 1480 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Gm23745-201ENSMUST00000104230 125 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Gm24294-201ENSMUST00000158295 277 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 Mir6973a-201ENSMUST00000183646 78 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Gm33707-201ENSMUST00000195135 569 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 AC134537.1-201ENSMUST00000219205 265 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 AC134601.2-201ENSMUST00000221071 130 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 AC137871.1-201ENSMUST00000228278 475 ntBASIC13.92□□□□□ -0.18
StrcQ8VIM6 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
StrcQ8VIM6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.91□□□□□ -0.18
StrcQ8VIM6 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Gm16305-201ENSMUST00000140747 556 ntBASIC13.91□□□□□ -0.18
StrcQ8VIM6 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
StrcQ8VIM6 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.91□□□□□ -0.18
StrcQ8VIM6 AC102847.1-202ENSMUST00000226313 1245 ntBASIC13.91□□□□□ -0.18
StrcQ8VIM6 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.91□□□□□ -0.18
StrcQ8VIM6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC13.91□□□□□ -0.18
StrcQ8VIM6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.91□□□□□ -0.18
StrcQ8VIM6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
StrcQ8VIM6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
StrcQ8VIM6 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
StrcQ8VIM6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
StrcQ8VIM6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.9□□□□□ -0.18
StrcQ8VIM6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
StrcQ8VIM6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
StrcQ8VIM6 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.9□□□□□ -0.18
StrcQ8VIM6 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC13.9□□□□□ -0.18
StrcQ8VIM6 Gm19927-201ENSMUST00000185792 781 ntBASIC13.9□□□□□ -0.18
StrcQ8VIM6 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
StrcQ8VIM6 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
StrcQ8VIM6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms