Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.88□□□□□ -0.35
TraipQ8VIG6 Gm15432-201ENSMUST00000121106 195 ntBASIC12.88□□□□□ -0.35
TraipQ8VIG6 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.88□□□□□ -0.35
TraipQ8VIG6 Gm27530-201ENSMUST00000184096 98 ntBASIC12.88□□□□□ -0.35
TraipQ8VIG6 Gm45118-201ENSMUST00000208928 825 ntBASIC12.88□□□□□ -0.35
TraipQ8VIG6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.88□□□□□ -0.35
TraipQ8VIG6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.88□□□□□ -0.35
TraipQ8VIG6 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.88□□□□□ -0.35
TraipQ8VIG6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TraipQ8VIG6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm30655-201ENSMUST00000220498 1383 ntTSL 5 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.87□□□□□ -0.35
TraipQ8VIG6 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm12036-201ENSMUST00000120008 530 ntBASIC12.87□□□□□ -0.35
TraipQ8VIG6 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Mir1943-201ENSMUST00000158276 73 ntBASIC12.87□□□□□ -0.35
TraipQ8VIG6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm4310-201ENSMUST00000177847 889 ntBASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm17931-201ENSMUST00000208132 634 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms