Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Gm14660-201ENSMUST00000119809 575 ntBASIC12.42□□□□□ -0.42
Trim60Q8VI40 Gm13875-201ENSMUST00000120162 282 ntBASIC12.42□□□□□ -0.42
Trim60Q8VI40 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Gm13316-201ENSMUST00000140537 691 ntBASIC12.42□□□□□ -0.42
Trim60Q8VI40 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Gm2546-201ENSMUST00000182630 991 ntBASIC12.42□□□□□ -0.42
Trim60Q8VI40 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.42□□□□□ -0.42
Trim60Q8VI40 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim60Q8VI40 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Gm25043-201ENSMUST00000158604 212 ntBASIC12.41□□□□□ -0.42
Trim60Q8VI40 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.41□□□□□ -0.42
Trim60Q8VI40 Mir7085-201ENSMUST00000184353 66 ntBASIC12.41□□□□□ -0.42
Trim60Q8VI40 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.41□□□□□ -0.42
Trim60Q8VI40 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim60Q8VI40 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.4□□□□□ -0.42
Trim60Q8VI40 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.4□□□□□ -0.42
Trim60Q8VI40 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Gm13226-201ENSMUST00000117838 404 ntBASIC12.4□□□□□ -0.42
Trim60Q8VI40 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.4□□□□□ -0.42
Trim60Q8VI40 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Gm37008-201ENSMUST00000195712 319 ntBASIC12.4□□□□□ -0.42
Trim60Q8VI40 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim60Q8VI40 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim60Q8VI40 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms