Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Gm11439-201ENSMUST00000118598 409 ntBASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Gm14247-201ENSMUST00000120950 237 ntBASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Gm27341-201ENSMUST00000183570 106 ntBASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 AY036118-201ENSMUST00000200021 923 ntBASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Gm22133-201ENSMUST00000102082 109 ntBASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Gm5455-201ENSMUST00000058710 715 ntBASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rprd1aQ8VDS4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rprd1aQ8VDS4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rprd1aQ8VDS4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rprd1aQ8VDS4 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.4□□□□□ -0.43
Rprd1aQ8VDS4 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms