Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vopp1Q8R1C3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vopp1Q8R1C3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vopp1Q8R1C3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm14071-201ENSMUST00000117817 509 ntBASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm15528-201ENSMUST00000117821 864 ntBASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm25554-201ENSMUST00000158075 113 ntBASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Mir6407-201ENSMUST00000184510 101 ntBASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm39288-201ENSMUST00000210554 446 ntBASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm19009-201ENSMUST00000223072 823 ntBASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm25517-201ENSMUST00000083865 134 ntBASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vopp1Q8R1C3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm29410-201ENSMUST00000188383 694 ntBASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm43163-201ENSMUST00000196571 442 ntBASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm3619-201ENSMUST00000219947 775 ntBASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vopp1Q8R1C3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vopp1Q8R1C3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vopp1Q8R1C3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms