Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rdh1Q8CGV4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Map1b-203ENSMUST00000223725 2669 ntBASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Gm4310-201ENSMUST00000177847 889 ntBASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rdh1Q8CGV4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Gm13809-201ENSMUST00000117921 597 ntBASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Gm5523-201ENSMUST00000180415 997 ntBASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Gm38117-201ENSMUST00000194653 939 ntBASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Gm2553-201ENSMUST00000215986 605 ntBASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rdh1Q8CGV4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rdh1Q8CGV4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rdh1Q8CGV4 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms