Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Gm12314-201ENSMUST00000118104 538 ntBASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Gm24196-201ENSMUST00000179161 110 ntBASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28bQ8CEG5 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Gm18018-201ENSMUST00000198273 408 ntBASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Gm45930-201ENSMUST00000221330 292 ntBASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 203.3 ms