Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Gm5705-201ENSMUST00000066241 711 ntBASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Gm12501-201ENSMUST00000119163 529 ntBASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Gm11331-201ENSMUST00000119764 288 ntBASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Gm5733-201ENSMUST00000190232 939 ntBASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Gm43378-201ENSMUST00000199336 582 ntBASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Gm9797-202ENSMUST00000218003 294 ntBASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Prpf31Q8CCF0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm15004-201ENSMUST00000119192 630 ntBASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm28686-201ENSMUST00000187404 609 ntBASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf31Q8CCF0 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms