Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Gm6114-201ENSMUST00000182472 968 ntBASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Gm45575-201ENSMUST00000210283 548 ntBASIC13.89□□□□□ -0.19
Shisa4Q8CA71 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.89□□□□□ -0.19
Shisa4Q8CA71 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.89□□□□□ -0.19
Shisa4Q8CA71 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa4Q8CA71 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Gm13045-201ENSMUST00000119019 712 ntBASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Gm19459-201ENSMUST00000176240 835 ntBASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Gm8100-201ENSMUST00000182906 988 ntBASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Gm5714-201ENSMUST00000197343 566 ntBASIC13.88□□□□□ -0.19
Shisa4Q8CA71 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Gm45113-201ENSMUST00000207518 165 ntBASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Shisa4Q8CA71 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm12501-201ENSMUST00000119163 529 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm28937-201ENSMUST00000185413 695 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm29400-201ENSMUST00000187208 695 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm28662-201ENSMUST00000188446 695 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm28251-201ENSMUST00000188835 695 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm37246-201ENSMUST00000192665 835 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm37318-201ENSMUST00000194325 695 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm38017-201ENSMUST00000194768 695 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm37287-201ENSMUST00000195449 695 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm37793-201ENSMUST00000195548 695 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm6450-201ENSMUST00000200896 574 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa4Q8CA71 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms