Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Gm23949-201ENSMUST00000104027 127 ntBASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Gm12997-201ENSMUST00000120207 640 ntBASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Gm18212-201ENSMUST00000211678 889 ntBASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Mir433-201ENSMUST00000093564 124 ntBASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc60Q8C4J0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Gm15004-201ENSMUST00000119192 630 ntBASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Gm27341-201ENSMUST00000183570 106 ntBASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 Gm13722-201ENSMUST00000117964 3066 ntBASIC15.28■□□□□ 0.04
Ccdc60Q8C4J0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Gm43417-201ENSMUST00000201586 5207 ntBASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Gm11439-201ENSMUST00000118598 409 ntBASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Gm24990-201ENSMUST00000157406 323 ntBASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Gm28071-201ENSMUST00000190355 478 ntBASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ccdc60Q8C4J0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms