Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Gm8146-201ENSMUST00000192106 1847 ntBASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Gm9415-201ENSMUST00000200462 1321 ntBASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Gm14071-201ENSMUST00000117817 509 ntBASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Gm38314-201ENSMUST00000195709 625 ntBASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Gm45135-201ENSMUST00000206787 1184 ntBASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Gm19046-201ENSMUST00000221263 1298 ntBASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Gm12712-201ENSMUST00000120676 801 ntBASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Gm24328-201ENSMUST00000175104 67 ntBASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Gm25998-201ENSMUST00000175397 53 ntBASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Mir6941-201ENSMUST00000184711 59 ntBASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Gm18801-201ENSMUST00000186616 536 ntBASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Gm9916-201ENSMUST00000192943 1228 ntBASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Gm5340-201ENSMUST00000203733 880 ntBASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 AC158392.3-201ENSMUST00000224271 1284 ntBASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Gm8181-201ENSMUST00000062242 669 ntBASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col16a1Q8BLX7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Gm7525-201ENSMUST00000219425 454 ntBASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Gm14005-208ENSMUST00000223654 681 ntBASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Gm5468-202ENSMUST00000227851 682 ntBASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Gm19692-201ENSMUST00000203856 2084 ntBASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col16a1Q8BLX7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Col16a1Q8BLX7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col16a1Q8BLX7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col16a1Q8BLX7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col16a1Q8BLX7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
Col16a1Q8BLX7 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col16a1Q8BLX7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms