Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gm5700-201ENSMUST00000191483 989 ntBASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gm38314-201ENSMUST00000195709 625 ntBASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gm9369-201ENSMUST00000196009 733 ntBASIC16.77■□□□□ 0.28
Usp54Q8BL06 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gm19692-201ENSMUST00000203856 2084 ntBASIC16.77■□□□□ 0.28
Usp54Q8BL06 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.77■□□□□ 0.28
Usp54Q8BL06 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp54Q8BL06 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Usp54Q8BL06 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Usp54Q8BL06 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp54Q8BL06 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Usp54Q8BL06 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Usp54Q8BL06 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp54Q8BL06 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Usp54Q8BL06 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Usp54Q8BL06 Gm13284-201ENSMUST00000121020 547 ntBASIC16.77■□□□□ 0.27
Usp54Q8BL06 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC16.77■□□□□ 0.27
Usp54Q8BL06 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC16.77■□□□□ 0.27
Usp54Q8BL06 Gm22146-201ENSMUST00000157397 288 ntBASIC16.77■□□□□ 0.27
Usp54Q8BL06 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Usp54Q8BL06 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC16.77■□□□□ 0.27
Usp54Q8BL06 Gm34379-201ENSMUST00000195036 290 ntBASIC16.77■□□□□ 0.27
Usp54Q8BL06 Gm42599-201ENSMUST00000201308 469 ntBASIC16.77■□□□□ 0.27
Usp54Q8BL06 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC16.77■□□□□ 0.27
Usp54Q8BL06 AC154361.2-201ENSMUST00000224747 943 ntBASIC16.77■□□□□ 0.27
Usp54Q8BL06 CT025602.2-201ENSMUST00000226553 772 ntBASIC16.77■□□□□ 0.27
Usp54Q8BL06 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Usp54Q8BL06 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Gm12453-201ENSMUST00000121981 331 ntBASIC16.76■□□□□ 0.27
Usp54Q8BL06 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Gm29067-201ENSMUST00000190821 470 ntBASIC16.76■□□□□ 0.27
Usp54Q8BL06 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp54Q8BL06 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Gm13422-201ENSMUST00000118834 504 ntBASIC16.75■□□□□ 0.27
Usp54Q8BL06 Gm15197-201ENSMUST00000120526 478 ntBASIC16.75■□□□□ 0.27
Usp54Q8BL06 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Gm11502-201ENSMUST00000120917 1211 ntBASIC16.75■□□□□ 0.27
Usp54Q8BL06 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.75■□□□□ 0.27
Usp54Q8BL06 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp54Q8BL06 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms